ImageJ/Fiji micro-Workshop "Introduction to Image Processing and Analysis using Fiji

March 2019 | IGC - Lisbon 

1^st seminar of a series being organised by the UIC: Advanced Imaging Facility team in 2019 for new users that aim to learn the basics of image analysis and processing, which will cover the basics of ImageJ/Fiji interface and usage, image filtering and enhancement, creating and processing image masks, working with pixels and objects and exploring some techniques for analysis and feature extraction and a quick introduction to ImageJ macro language.

Course on High Throughput Screening and Image Analysis for Biosciences @ i3S

27-31 May 2019 | i3S, Porto 

Fundamentally practical, this course aims introducing the participants in experimental design, image acquisition, image, and data analysis for high throughput (HT) experiments. These are essential skills when generating a massive amount of imaged-based data in the biosciences field. Lectures will be given by specialists in the field and participants will learn how to use state of the art technology for HT experimentation and open-source software for image and data analysis. Attendants will get acquainted with use of automated liquid handling equipment and high content (HC) imagers such as IN Cell Analyzer (HCS microscope) and ImageStream (imaging flow cytometer). Interaction with HTS/HCS specialists will be fostered due to the restricted amount of participants.

FEES:

Registration until 15^th April 2019 | Payment deadline: 22^nd April

i3S members – 180€ (lunch not included)

General registration - 250€ (lunch included)

Between 16^th April and 20^th May 2019 | Payment deadline: 27^th May

i3S members or General registration – 350€ (lunch included)

Limited number of participants: 20

Contact: This email address is being protected from spambots. You need JavaScript enabled to view it.

For more information and registration link: https://www.i3s.up.pt/content/training?v=71

ImageJ/Fiji micro-Workshop "Introduction to Image Processing and Analysis using Fiji

June 2019 | IGC - Lisbon 

2^nd seminar of a series being organised by the UIC:Advanced Imaging Facility team in 2019 for users that aim to learn the basics of image processing and analysis,this workshop covered the basics of ImageJ/Fiji interface and usage, image filtering and enhancement, creating and processing image masks, working with pixels and objects, exploring some techniques for analysis and feature extraction and a quick introduction to ImageJ macro language.

NEUBIAS Training Schools 12 &13 @ Porto

14-17 October 2019 | IBMC/i3S and INESC TEC, Porto 

Dear Bioimaging colleague,

 
NEUBIAS, the Network of European BioImage Analysts (www.neubias.org), is delighted to announce two new Training Schools on BioImage Analysis:

• TS12 for Early Career Investigators (life scientists and facility staff).
• TS13 for Facility Staff (staff only, already comfortable with analysis workflows; focus is scripting with FIJI & Python)

The focus of the trainings will be on construction and automation of BioImage Analysis workflows, using as examples more than one toolbox and different exercises. The schools will be held in Porto, 14-17th of October 2019, hosted by IBMC/i3S and INESC TEC

NEUBIAS schools are an excellent opportunity to learn from many experts in Bioimage Analysis (we are expecting >20 specialists at the event) and “…a great mix of intensive learning and community networking” (former trainee testimonial!). The schools will include practical sessions and seminars on ImageJ for analysis and publication, scripting/macros in ImageJ and Python and session on ethics in image analysis and “work on own data”.

Within the COST framework (funders of NEUBIAS), we will offer up to 7 travel grants per school to applicants who qualify.

More information about schools (programme & trainers) and venue, travel & lodge available at our website:
eubias.org/NEUBIAS/training-schools/
eubias.org/NEUBIAS/training-schools/eci/ts12-porto-2019/
eubias.org/NEUBIAS/training-schools/staff/ts13-porto-2019/

Local organizers: Paula Sampaio and João Paulo Cunha

Programme organizers: Dominic Waithe, Bram van den Broek, Hanneke Okkenhaug, Arianne Bercowsky Rama, Jan Eglinger, Robert Haase, Gabriel Martins

"From workflows to ImageJ macros" micro-workshop

July 2019 | IGC - Lisbon 

3^rd seminar of 2019 series being organised by the UIC: Advanced Imaging Facility team in 2019. The aim of this workshop is to teach new ImageJ/Fiji users how to create new macros or adapt already existing ones. The topics covered by this workshop go from an introduction to command recorder, language syntax and text editor, applying a macro in batch mode, creating variables and loops, using conditional statements and snippets, working with results tables, custom functions and dialog windows and using other plugins.